Difference between revisions of "Cipher cracking 2019 weekly progress"
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# Goals for week 5: | # Goals for week 5: | ||
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# Week 5 work done: | # Week 5 work done: | ||
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# Goals for week 6: | # Goals for week 6: | ||
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# Week 6 work done: | # Week 6 work done: | ||
| − | #* | + | #* Received package (saliva collection kit) from 23andme |
| + | #* Returned the packages to 23andme to extract DNA data | ||
| + | #* Meeting with Derek and Peter to discuss about slides presentation | ||
| + | #* Completed the slides together with Peter | ||
# Goals for week 7: | # Goals for week 7: | ||
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# Week 6 work done: | # Week 6 work done: | ||
| − | #* | + | #* Meeting with Azizul and Derek to discuss about slides |
| + | #* Meeting with Azizul to adjust slides for proposal seminar at Hub central | ||
| + | #* Finished the slides presentation and submitted to MyUni | ||
# Goals for week 7: | # Goals for week 7: | ||
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====Azizul==== | ====Azizul==== | ||
# Week 7 work done: | # Week 7 work done: | ||
| − | #* | + | #* Meeting with Derek and Peter |
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# Week 7 work done: | # Week 7 work done: | ||
| − | #* | + | #* Received DNA data from 23andme |
| + | #* Began uploading data to GedMatch Genesis | ||
# Goals for week 8: | # Goals for week 8: | ||
| − | #* | + | #* Completing API for SNP database |
=== Semester 1 Week 8=== | === Semester 1 Week 8=== | ||
Revision as of 19:49, 7 May 2019
Contents
Weekly progress and questions
This is where you record your progress and ask questions. Make sure you update this every week. The deadline is every Friday evening. However, if you sometimes slip a little into the weekend (so long as you don't do it too often) we won't be too hard on your marks.
Please remember that we make use of this progress section to give you your project mark. Your mark will suffer if you don't complete this section.
Semester 1 Week 1
Azizul
- Week 1 work done:
- Researched about the Somerton Man case
- Attend project briefing with Hong Gunn
- First meeting with Zihe Wang
- Planned a meeting with Derek
- Goals for week 2:
- Initiate a meeting with Prof. Derek Abbott
- Understand what the project is about
Zihe (Peter)
- Week 1 work done:
- Met project partner Azizul.
- Planned a meeting with Derek Abbott.
- Research on the Somerton Man's case.
- Goals for week 2:
- Meeting with Derek.
- Get to know more detail about the project.
Semester 1 Week 2
Azizul
- Week 2 work done:
- Attended a briefing from the lab support manager, Andrew Heathershaw
- Meeting with Derek and Zihe
- Briefing about bioinformatics engineering
- DNAs, rsid, chromosomes
- Introduction to the project wiki
- Created 2019 wiki
- Started exploring wiki and details of previous work done by previous students
- Goals for week 3:
- Start requesting for fund provided by uni to get the kit from 23andme website (https://www.23andme.com/en-int/)
Zihe (Peter)
- Week 2 work done:
- Briefing from the lab support manager, Andrew Heathershaw
- Meeting with project members Derek and Azizul
- Details about the overall project, explained by Derek
- Goals for week 3:
- Count the data in the given data file by Derek
Semester 1 Week 3
Azizul
- Week 3 work done:
- Requested fund from the School of Electrical and Electronic Engineering to purchase the kit from 23andme
- Completed kit order from 23andMe
- Goals for week 4:
Zihe (Peter)
- Week 3 work done:
- Counted the number of SNP for each chromosome using C++ and excel
- Goals for week 4:
Semester 1 Week 4
Azizul
- Week 4 work done:
- Meeting with Derek
- Goals for week 5:
Zihe (Peter)
- Week 4 work done:
- Completed generating random SNP to fill in the blanks in Somerton man's DNA file
- Goals for week 5:
Semester 1 Week 5
Azizul
- Week 5 work done:
- Meeting with Peter to discuss about the presentation for proposal seminar
- Goals for week 6:
Zihe (Peter)
- Week 5 work done:
- Meeting with Azizul regarding proposal seminar presentation
- Goals for week 6:
Semester 1 Week 6
Azizul
- Week 6 work done:
- Received package (saliva collection kit) from 23andme
- Returned the packages to 23andme to extract DNA data
- Meeting with Derek and Peter to discuss about slides presentation
- Completed the slides together with Peter
- Goals for week 7:
Zihe (Peter)
- Week 6 work done:
- Meeting with Azizul and Derek to discuss about slides
- Meeting with Azizul to adjust slides for proposal seminar at Hub central
- Finished the slides presentation and submitted to MyUni
- Goals for week 7:
Semester 1 Week 7
Azizul
- Week 7 work done:
- Meeting with Derek and Peter
- Goals for week 8:
Zihe (Peter)
- Week 7 work done:
- Received DNA data from 23andme
- Began uploading data to GedMatch Genesis
- Goals for week 8:
- Completing API for SNP database
Semester 1 Week 8
Azizul
- Week 8 work done:
- Goals for week 9:
Zihe (Peter)
- Week 8 work done:
- Goals for week 9:
